Computer ScienceMedicine

Gene Selection for Cancer Classification Using DCA

tlooto Summary

A combined SVM-feature selection approach based on the smoothly clipped absolute deviation (SCAD)penalty is developed, minimizing directly the classifier performance, which leads to a successive linear programming algorithm with finite convergence.

Abstract

The problem of gene selection for cancer classification is considered.A combined SVM-feature selection approach based on the smoothly clipped absolute deviation(SCAD)penalty is developed,minimizing directly the classifier performance.To solve the optimization problems,apply the DCA(difference of convex functions algorithms) which is a general framework for nonconvex continuous optimization.This leads to a successive linear programming algorithm with finite convergence.Preliminary computational experiments on different real data demonstrate that this method accomplishes the desired goal:Suppression of a large number of features with a small error of classification.

Citation format

HOAI, Hi; UFR, M. Gene selection for cancer classification using DCA. Journal of Frontiers of Computer Science and Technology, 2009.